Miyakogusa Predicted Gene

Lj4g3v0510070.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I1JF14_SOYBN 176 81.1 83.0 (tr|I1JF14) Uncharacterized protein OS=Glycine max PE=4 SV=1

TAIR_pep AT3G59800.1 146 70.3 80.2 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast hits to 8061 proteins in 537 species: Archae - 2; Bacteria - 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses - 49; Other Eukaryotes - 4961 (source: NCBI BLink). | chr3:22094597-22096174 REVERSE LENGTH=186

Medicago Medtr4g087630.1 161 81.0 83.0 | hypothetical protein | HC | chr4:34431102-34425753 | 20130731

Soybean Glyma02g15700.1 176 81.1 83.0

LJGI gnl|LJGI|TC71167 940 98.6 98.6 similar to UniRef100_A7QAV9 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v0510070.1 length: 165 aa.

no_ID

method AccNumber shortName E-value location

Coil coil coiled-coil NA 62-83

Seg seg seg NA 56-71
107-165

Wolf-PSORT

Lj4g3v0510070.1 nucl 12.5, cyto_nucl 7

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v0510070.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I1JF14_SOYBN	176	81.1	83.0	(tr\|I1JF14) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep	AT3G59800.1	146	70.3	80.2	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G43795.2); Has 15361 Blast hits to 8061 proteins in 537 species: Archae - 2; Bacteria - 622; Metazoa - 7561; Fungi - 1246; Plants - 920; Viruses - 49; Other Eukaryotes - 4961 (source: NCBI BLink). \| chr3:22094597-22096174 REVERSE LENGTH=186
Medicago	Medtr4g087630.1	161	81.0	83.0	\| hypothetical protein \| HC \| chr4:34431102-34425753 \| 20130731
Soybean	Glyma02g15700.1	176	81.1	83.0
LJGI	gnl\|LJGI\|TC71167	940	98.6	98.6	similar to UniRef100_A7QAV9 Cluster: Chromosome chr5 scaffold_72, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr5 scaffold_72, whole genome shotgun sequence - Vitis vinifera (Grape), partial (97%)

no_ID
Lj4g3v0510070.1				length: 165 aa.
method	AccNumber	shortName	E-value	location
Coil	coil	coiled-coil	NA	62-83
Seg	seg	seg	NA	56-71 107-165