Miyakogusa Predicted Gene

Lj4g3v0506920.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KLT6_SOYBN 304 62.8 70.2 (tr|I1KLT6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G68810.1 121 41.5 62.8 | Symbols: | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | chr1:25861289-25862882 FORWARD LENGTH=368
Medicago Medtr4g087920.1 256 58.5 71.4 | helix loop helix DNA-binding domain protein | HC | chr4:34477373-34480967 | 20130731
Soybean Glyma07g32690.1 304 62.8 70.2  
LJGI gnl|LJGI|TC82584 1614 99.6 99.6 weakly similar to UniRef100_A7P9Y6 Cluster: Chromosome chr14 scaffold_9, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr14 scaffold_9, whole genome shotgun sequence - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0506920.1 length: 274 aa.
IPR011598 Myc-type, basic helix-loop-helix (bHLH) domain
method AccNumber shortName E-value location
Molecular Function GO:0046983 protein dimerization activity    
Gene3D G3DSA:4.10.280.10 no description 2.7e-12 81-129
HMMPfam PF00010 HLH 1.5e-09 80-126
HMMSmart SM00353 helix 6.4e-12 83-132
ProfileScan PS50888 BHLH 15.567 77-126
superfamily SSF47459 HLH, 2.3e-11 77-132
no_ID  
Coil coil coiled-coil NA 175-196
HMMPanther PTHR10985 BASIC 1.4e-19 12-127
HMMPanther PTHR10985:SF43 OS08G0477900 1.4e-19 12-127
Seg seg seg NA 31-41
86-92
262-266
Wolf-PSORT
Lj4g3v0506920.1	nucl 8, chlo 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0506920.1