Miyakogusa Predicted Gene
- Lj4g3v0506850.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TLC5_SOYBN |
113 |
96.5 |
100.0 |
(tr|C6TLC5) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT5G18790.1 |
88.2 |
75.9 |
86.2 |
| Symbols: | Ribosomal protein L33 family protein | chr5:6266324-6266500 REVERSE LENGTH=58 |
| Medicago |
Medtr1g015500.1 |
110 |
93.0 |
98.2 |
| 50S ribosomal protein L33 | HC | chr1:3886816-3889784 | 20130731 |
| Soybean |
Glyma17g31050.1 |
113 |
96.5 |
100.0 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0506850.1 |
length: 57 aa. |
| IPR001705 |
Ribosomal protein L33 |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0003735 |
structural constituent of ribosome |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Cellular Component |
GO:0005840 |
ribosome |
|
|
| Biological Process |
GO:0006412 |
translation |
|
|
| HMMPfam |
PF00471 |
Ribosomal_L33 |
1.1e-13 |
12-55 |
| HMMTigr |
TIGR01023 |
rpmG_bact: |
5.9e-19 |
4-57 |
| IPR011332 |
Ribosomal protein, zinc-binding domain |
| Molecular Function |
GO:0003735 |
structural constituent of ribosome |
|
|
| Cellular Component |
GO:0005622 |
intracellular |
|
|
| Cellular Component |
GO:0005840 |
ribosome |
|
|
| Biological Process |
GO:0006412 |
translation |
|
|
| superfamily |
SSF57829 |
Zn-binding |
6.3e-13 |
5-55 |
| no_ID |
|
| HMMPanther |
PTHR15238 |
FAMILY |
2.3e-23 |
1-57 |
| HMMPanther |
PTHR15238:SF1 |
SUBFAMILY |
2.3e-23 |
1-57 |
- Wolf-PSORT
Lj4g3v0506850.1 cyto 8, chlo 2, mito 2, chlo_mito 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0506850.1 |
|