Miyakogusa Predicted Gene
- Lj4g3v0496560.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3S1J1_LOTJA |
478 |
99.6 |
99.6 |
(tr|I3S1J1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT1G20575.1 |
425 |
86.3 |
94.8 |
| Symbols: | Nucleotide-diphospho-sugar transferases superfamily protein | chr1:7126987-7128677 REVERSE LENGTH=246 |
| Medicago |
Medtr4g087885.2 |
437 |
81.3 |
85.4 |
| dolichol-phosphate mannosyltransferase | HC | chr4:34584583-34587333 | 20130731 |
| Soybean |
Glyma13g24040.1 |
453 |
93.2 |
96.2 |
|
| LJGI |
gnl|LJGI|TC60033 |
1398 |
100.0 |
100.0 |
similar to UniRef100_A7NVU2 Cluster: Chromosome chr18 scaffold_1, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr18 scaffold_1, whole genome shotgun sequence - Vitis vinifera (Grape), complete |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0496560.1 |
length: 235 aa. |
| IPR001173 |
Glycosyl transferase, family 2 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF00535 |
Glycos_transf_2 |
5e-36 |
13-181 |
| no_ID |
|
| Gene3D |
G3DSA:3.90.550.10 |
no description |
1.7e-29 |
9-208 |
| HMMPanther |
PTHR10859 |
GLYCOSYL |
5e-92 |
11-235 |
| superfamily |
SSF53448 |
Nucleotide-diphospho-sugar |
1.6e-46 |
7-226 |
- Wolf-PSORT
Lj4g3v0496560.1 cyto 9, nucl 1, extr 1, E.R. 1, pero 1, cysk 1, cysk_nucl 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0496560.1 |
|