Miyakogusa Predicted Gene

Lj4g3v0486450.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SW86_LOTJA 437 98.6 99.1 (tr|I3SW86) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G60860.1 415 91.2 96.8 | Symbols: AtRABA1f, RABA1f | RAB GTPase homolog A1F | chr5:24484750-24485565 FORWARD LENGTH=217
Medicago Medtr2g014990.1 432 96.8 98.6 | RAB GTPase-like protein A1D | HC | chr2:4375511-4372352 | 20130731
Soybean Glyma13g24160.1 428 95.9 97.7  
LJGI gnl|LJGI|TC57268 1265 99.4 99.4 homologue to UniRef100_Q08149 Cluster: GTP-binding protein; n=1; Pisum sativum|Rep: GTP-binding protein - Pisum sativum (Garden pea), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0486450.1 length: 217 aa.
IPR001806 Small GTPase superfamily
method AccNumber shortName E-value location
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
FPrintScan PR00449 RASTRNSFRMNG 1.4e-42 14-35
37-53
55-77
117-130
152-174
HMMPfam PF00071 Ras 4.6e-62 15-175
IPR002041 Ran GTPase
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0006886 intracellular protein transport    
Biological Process GO:0006913 nucleocytoplasmic transport    
Biological Process GO:0007165 signal transduction    
HMMSmart SM00176 Ran 3.1e-08 19-214
IPR003578 Small GTPase superfamily, Rho type
Molecular Function GO:0005525 GTP binding    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0007264 small GTPase mediated signal transduction    
HMMSmart SM00174 Rho 3e-12 16-173
IPR003579 Small GTPase superfamily, Rab type
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0007264 small GTPase mediated signal transduction    
Biological Process GO:0015031 protein transport    
HMMSmart SM00175 Rab 1.9e-110 14-177
IPR005225 Small GTP-binding protein domain
Molecular Function GO:0005525 GTP binding    
HMMTigr TIGR00231 small_GTP: 5.9e-40 12-170
IPR020849 Small GTPase superfamily, Ras type
Molecular Function GO:0003924 GTPase activity    
Molecular Function GO:0005525 GTP binding    
Biological Process GO:0006184 GTP catabolic process    
Biological Process GO:0007165 signal transduction    
Cellular Component GO:0016020 membrane    
HMMSmart SM00173 Ras 1.4e-28 11-177
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 8.8e-66 9-215
no_ID  
Gene3D G3DSA:3.40.50.300 no description 2.5e-72 6-215
HMMPanther PTHR24073 FAMILY 1.6e-124 4-216
HMMPanther PTHR24073:SF87 SUBFAMILY 1.6e-124 4-216
ProfileScan PS51419 RAB 35.919 9-215
Wolf-PSORT
Lj4g3v0486450.1	cyto 10, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0486450.1