Miyakogusa Predicted Gene

Lj4g3v0484820.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M054_SOYBN 609 75.8 80.8 (tr|I1M054) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT2G33860.1 484 57.6 70.1 | Symbols: ETT, ARF3 | Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related | chr2:14325444-14328613 REVERSE LENGTH=608
Medicago Medtr4g088210.2 600 74.3 79.3 | auxin response factor 3 | HC | chr4:34796152-34801111 | 20130731
Soybean Glyma13g24240.1 610 75.8 80.8  
LJGI gnl|LJGI|TC60440 1009 100.0 100.0 similar to UniRef100_A2Q532 Cluster: Transcriptional factor B3; Auxin response factor; n=1; Medicago truncatula|Rep: Transcriptional factor B3; Auxin response factor - Medicago truncatula (Barrel medic), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0484820.2 length: 397 aa.
IPR003340 B3 DNA binding domain
method AccNumber shortName E-value location
Molecular Function GO:0003677 DNA binding    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
HMMPfam PF02362 B3 1.1e-24 150-251
HMMSmart SM01019 B3 3.6e-25 150-252
ProfileScan PS50863 B3 14.015 150-252
IPR010525 Auxin response factor
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Biological Process GO:0009725 response to hormone stimulus    
HMMPfam PF06507 Auxin_resp 2.1e-34 277-357
IPR015300 DNA-binding pseudobarrel domain
Gene3D G3DSA:2.40.330.10 no description 6.7e-41 143-253
superfamily SSF101936 DNA-binding 7.5e-46 133-290
no_ID  
Coil coil coiled-coil NA 116-137
HMMPanther PTHR31384 FAMILY 2.7e-187 16-384
Seg seg seg NA 15-40
71-81
125-140
Wolf-PSORT
Lj4g3v0484820.2	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0484820.2