Miyakogusa Predicted Gene

Lj4g3v0473170.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JDW8_MEDTR 752 99.7 99.7 (tr|G7JDW8) Multidrug resistance protein ABC transporter family OS=Medicago truncatula GN=MTR_4g081000 PE=4 SV=1
TAIR_pep AT4G05320.6 749 99.5 99.7 | Symbols: UBQ10 | polyubiquitin 10 | chr4:2718559-2719932 FORWARD LENGTH=381
Medicago Medtr4g081010.1 751 99.7 99.7 | polyubiquitin 3 | HC | chr4:31289111-31286219 | 20130731
Soybean Glyma13g24470.1 749 99.5 99.7  
LJGI gnl|LJGI|TC60580 2274 100.0 100.0 UniRef100_Q42397 Cluster: Hexaubiquitin protein; n=1; Helianthus annuus|Rep: Hexaubiquitin protein - Helianthus annuus (Common sunflower), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0473170.1 length: 381 aa.
IPR000626 Ubiquitin
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00240 ubiquitin 1.2e-33 6-74
82-150
158-226
234-302
310-378
HMMSmart SM00213 Ubiquitin 3e-35 1-72
77-148
153-224
229-300
305-376
IPR019954 Ubiquitin conserved site
PatternScan PS00299 UBIQUITIN_1 NA 27-52
103-128
179-204
255-280
331-356
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 30.452 1-76
77-152
153-228
229-304
305-380
IPR019956 Ubiquitin subgroup
FPrintScan PR00348 UBIQUITIN 4.5e-38 87-107
108-128
129-150
no_ID  
Gene3D G3DSA:3.10.20.90 no description 1.7e-48 1-77
78-153
154-230
231-305
306-379
HMMPanther PTHR10666 UBIQUITIN 0 1-381
superfamily SSF54236 Ubiquitin-like 1e-34 1-76
77-152
153-228
229-304
305-380
Wolf-PSORT
Lj4g3v0473170.1	cyto 8, cyto_nucl 7, chlo 2, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0473170.1