Miyakogusa Predicted Gene

Lj4g3v0462750.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3S397_LOTJA 360 90.4 90.4 (tr|I3S397) 40S ribosomal protein S6 OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT5G10360.1 336 84.3 86.8 | Symbols: EMB3010, RPS6B | Ribosomal protein S6e | chr5:3258734-3260142 REVERSE LENGTH=249
Medicago Medtr4g088595.1 359 89.3 90.9 | 40S ribosomal protein S6-2 | HC | chr4:35217876-35214826 | 20130731
Soybean Glyma13g31130.1 359 89.3 90.9  
LJGI gnl|LJGI|TC59887 1172 100.0 100.0 homologue to UniRef100_Q6SPR3 Cluster: Ribosomal protein S6; n=1; Glycine max|Rep: Ribosomal protein S6 - Glycine max (Soybean), complete
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0462750.1 length: 197 aa.
IPR001377 Ribosomal protein S6e
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR11502 40S 5.8e-135 2-197
HMMPfam PF01092 Ribosomal_S6e 1.1e-54 1-128
IPR018282 Ribosomal protein S6e, conserved site
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS00578 RIBOSOMAL_S6E NA 52-63
no_ID  
Seg seg seg NA 85-101
Wolf-PSORT
Lj4g3v0462750.1	nucl 6, cyto 6, cyto_nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0462750.1