Miyakogusa Predicted Gene

Lj4g3v0462600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KLL8_SOYBN 273 60.7 66.1 (tr|I1KLL8) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G33800.1 242 70.6 76.3 | Symbols: | Ribosomal protein S5 family protein | chr2:14300925-14302352 REVERSE LENGTH=303
Medicago Medtr4g088615.1 260 62.9 70.1 | ribosomal protein S5 | HC | chr4:35234781-35236988 | 20130731
Soybean Glyma07g31830.1 273 60.7 66.1  
LJGI gnl|LJGI|TC58836 1419 100.0 100.0 similar to UniRef100_A7QPU4 Cluster: Chromosome chr10 scaffold_138, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_138, whole genome shotgun sequence - Vitis vinifera (Grape), partial (66%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0462600.1 length: 293 aa.
IPR000851 Ribosomal protein S5
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPanther PTHR13718 RIBOSOMAL 4.2e-57 152-293
IPR005324 Ribosomal protein S5, C-terminal
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF03719 Ribosomal_S5_C 2.5e-23 229-292
IPR005712 Ribosomal protein S5, bacterial-type
Molecular Function GO:0003735 structural constituent of ribosome    
Biological Process GO:0006412 translation    
Cellular Component GO:0015935 small ribosomal subunit    
HMMTigr TIGR01021 rpsE_bact: 6.1e-55 151-291
IPR013810 Ribosomal protein S5, N-terminal
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HMMPfam PF00333 Ribosomal_S5 3.5e-24 152-216
ProfileScan PS50881 S5_DSRBD 24.995 152-215
IPR014720 Double-stranded RNA-binding-like domain
Gene3D G3DSA:3.30.160.20 no description 1.8e-21 150-213
IPR014721 Ribosomal protein S5 domain 2-type fold, subgroup
Gene3D G3DSA:3.30.230.10 no description 7.2e-25 219-290
IPR018192 Ribosomal protein S5, N-terminal, conserved site
PatternScan PS00585 RIBOSOMAL_S5 NA 169-201
IPR020568 Ribosomal protein S5 domain 2-type fold
superfamily SSF54211 Ribosomal 4.8e-20 221-293
no_ID  
HMMPanther PTHR13718:SF52 30S 4.2e-57 152-293
Seg seg seg NA 5-54
59-69
80-91
98-116
176-206
superfamily SSF54768 dsRNA-binding 7.5e-22 151-219
Wolf-PSORT
Lj4g3v0462600.1	chlo 12, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0462600.1