Miyakogusa Predicted Gene

Lj4g3v0451230.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7KWH0_MEDTR 229 51.7 55.7 (tr|G7KWH0) 50S ribosomal protein L21 OS=Medicago truncatula GN=MTR_7g111750 PE=3 SV=1
TAIR_pep AT4G30930.1 169 62.8 70.8 | Symbols: NFD1 | Ribosomal protein L21 | chr4:15050170-15051630 REVERSE LENGTH=270
Medicago Medtr7g111750.3 229 51.7 55.7 | 50S ribosomal protein L21, related protein | HC | chr7:45898598-45895061 | 20130731
Soybean Glyma13g24790.1 219 53.1 59.2  
LJGI gnl|LJGI|TC61628 1039 99.8 99.8 similar to UniRef100_A7R4U1 Cluster: 50S ribosomal protein L21; n=1; Vitis vinifera|Rep: 50S ribosomal protein L21 - Vitis vinifera (Grape), partial (52%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0451230.1 length: 277 aa.
IPR001787 Ribosomal protein L21
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
HAMAP MF_01363 Ribosomal_L21 21.948 147-250
HMMPanther PTHR21349 50S 9.9e-49 114-256
HMMPfam PF00829 Ribosomal_L21p 1e-30 148-243
HMMTigr TIGR00061 L21: 1.1e-26 148-249
IPR018258 Ribosomal protein L21, conserved site
Molecular Function GO:0003723 RNA binding    
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
PatternScan PS01169 RIBOSOMAL_L21 NA 219-241
no_ID  
Seg seg seg NA 76-102
116-125
204-214
223-237
264-277
superfamily SSF141091 L21p-like 1.9e-32 147-250
Wolf-PSORT
Lj4g3v0451230.1	chlo 9.5, chlo_mito 7, mito 3.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0451230.1 Not targeted -44.286 -0.596 -6.392 63.02% -37.299