Miyakogusa Predicted Gene

Lj4g3v0451140.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KLJ1_SOYBN 1097 87.5 91.6 (tr|I1KLJ1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G04910.1 990 78.3 87.3 | Symbols: NSF | AAA-type ATPase family protein | chr4:2489696-2495666 REVERSE LENGTH=742
Medicago Medtr4g088885.1 1055 83.2 90.5 | AAA family ATPase | HC | chr4:35479795-35492515 | 20130731
Soybean Glyma07g31570.1 1097 87.5 91.6  
LJGI gnl|LJGI|TC63930 1098 100.0 100.0 similar to UniRef100_Q40495 Cluster: N-ethylmaleimide sensitive fusion protein; n=1; Nicotiana tabacum|Rep: N-ethylmaleimide sensitive fusion protein - Nicotiana tabacum (Common tobacco), partial (24%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0451140.2 length: 608 aa.
IPR003593 AAA+ ATPase domain
method AccNumber shortName E-value location
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 3.5e-06 117-264
397-535
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 9.1e-10 121-261
402-515
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 232-250
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.5e-29 72-351
359-599
no_ID  
Gene3D G3DSA:1.10.8.60 no description 8.8e-20 272-352
Gene3D G3DSA:3.10.330.10 no description 5.2e-10 2-61
Gene3D G3DSA:3.40.50.300 no description 1.2e-17 110-271
381-516
HMMPanther PTHR23078 VESICULAR-FUSION 0 1-604
HMMPanther PTHR23078:SF0 SUBFAMILY 0 1-604
Seg seg seg NA 488-504
574-585
superfamily SSF54585 Cdc48 4.5e-13 2-67
Wolf-PSORT
Lj4g3v0451140.2	cyto 7, chlo 3, nucl 2, vacu 1, cysk 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0451140.2