Miyakogusa Predicted Gene

Lj4g3v0450840.2
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KLI0_SOYBN 1607 83.5 88.3 (tr|I1KLI0) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT4G21670.1 1109 59.7 72.9 | Symbols: CPL1, FRY2, ATCPL1 | C-terminal domain phosphatase-like 1 | chr4:11511511-11516922 FORWARD LENGTH=967
Medicago Medtr4g089010.1 1578 81.1 86.4 | double-stranded RNA-binding motif protein | HC | chr4:35626275-35616452 | 20130731
Soybean Glyma13g25010.1 1547 81.8 87.4  
LJGI gnl|LJGI|TC82668 533 99.3 99.3  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0450840.2 length: 955 aa.
IPR001159 Double-stranded RNA-binding
method AccNumber shortName E-value location
Molecular Function GO:0003725 double-stranded RNA binding    
HMMPfam PF00035 dsrm 7.3e-06 703-763
837-902
HMMSmart SM00358 Double-stranded 4.4e-06 700-764
836-905
ProfileScan PS50137 DS_RBD 11.601 728-765
835-906
IPR004274 NLI interacting factor
Molecular Function GO:0005515 protein binding    
HMMPfam PF03031 NIF 2.9e-07 144-363
HMMSmart SM00577 catalytic 2e-16 206-372
ProfileScan PS50969 FCP1 15.613 137-385
IPR014720 Double-stranded RNA-binding-like domain
Gene3D G3DSA:3.30.160.20 no description 5.2e-05 728-762
834-905
IPR023214 HAD-like domain
Gene3D G3DSA:3.40.50.1000 no description 1e-11 250-361
superfamily SSF56784 HAD-like 5.3e-22 127-398
no_ID  
HMMPanther PTHR23081 RNA 8.1e-33 90-447
Seg seg seg NA 670-690
superfamily SSF54768 dsRNA-binding 3.5e-08 829-919
703-763
Wolf-PSORT
Lj4g3v0450840.2	nucl 5, chlo 2, plas 2, E.R. 2, E.R._plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0450840.2