Miyakogusa Predicted Gene

Lj4g3v0450200.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1M296_SOYBN 261 58.6 75.5 (tr|I1M296) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G61150.6 251 57.3 74.3 | Symbols: | LisH and RanBPM domains containing protein | chr1:22542979-22544355 FORWARD LENGTH=226
Medicago Medtr2g012810.1 255 56.8 75.5 | LisH and RanBPM domain protein | HC | chr2:3306938-3301342 | 20130731
Soybean Glyma13g31720.3 261 58.6 75.5  
LJGI gnl|LJGI|TC63814 153 79.4 79.4 similar to UniRef100_A9TZ15 Cluster: Predicted protein; n=1; Physcomitrella patens subsp. patens|Rep: Predicted protein - Physcomitrella patens subsp. patens, partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0450200.1 length: 243 aa.
IPR006594 LisH dimerisation motif
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMSmart SM00667 Lissencephaly 3.8e-07 40-72
ProfileScan PS50896 LISH 11.091 40-72
IPR006595 CTLH, C-terminal LisH motif
HMMSmart SM00668 C-terminal 2.1e-12 78-135
ProfileScan PS50897 CTLH 12.845 78-135
IPR013144 CRA domain
HMMSmart SM00757 CT11-RanBPM 4e-17 131-227
IPR013720 LisH dimerisation motif, subgroup
HMMPfam PF08513 LisH 3.3e-06 42-68
IPR024964 CTLH/CRA C-terminal to LisH motif domain
HMMPfam PF10607 CLTH 8.8e-33 80-218
no_ID  
HMMPanther PTHR12864 RAN 2.3e-71 25-233
Wolf-PSORT
Lj4g3v0450200.1	cyto 10, cyto_nucl 8.5, nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0450200.1