Miyakogusa Predicted Gene

Lj4g3v0445700.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SRS7_LOTJA 746 99.7 99.7 (tr|I3SRS7) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G21520.1 569 64.9 79.9 | Symbols: | Transducin/WD40 repeat-like superfamily protein | chr4:11447514-11450377 REVERSE LENGTH=425
Medicago Medtr4g091080.1 721 82.7 90.4 | telomerase cajal body-like protein | HC | chr4:36047911-36057514 | 20130731
Soybean Glyma07g30960.1 694 80.3 88.9  
LJGI gnl|LJGI|TC66159 1459 99.9 99.9 similar to UniRef100_Q0DNR7 Cluster: Os03g0738000 protein; n=1; Oryza sativa Japonica Group|Rep: Os03g0738000 protein - Oryza sativa subsp. japonica (Rice), partial (31%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0445700.1 length: 413 aa.
IPR001680 WD40 repeat
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00400 WD40 0.0029 46-75
242-279
304-325
HMMSmart SM00320 WD40 7.1 28-76
94-139
142-185
192-236
239-279
287-325
328-386
ProfileScan PS50082 WD_REPEATS_2 8.737 306-334
IPR015943 WD40/YVTN repeat-like-containing domain
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:2.130.10.10 no description 4.6e-32 45-175
176-367
IPR017986 WD40-repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50294 WD_REPEATS_REGION 13.765 44-376
superfamily SSF50978 WD40 4.9e-45 48-397
no_ID  
HMMPanther PTHR13211 UNCHARACTERIZED 3.7e-136 3-399
Wolf-PSORT
Lj4g3v0445700.1	nucl 10, chlo 2, cyto 1, vacu 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0445700.1