Miyakogusa Predicted Gene

Lj4g3v0445550.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SKM1_LOTJA 1169 97.9 97.9 (tr|I3SKM1) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G05020.1 865 73.0 82.8 | Symbols: NDB2 | NAD(P)H dehydrogenase B2 | chr4:2572752-2576222 FORWARD LENGTH=582
Medicago Medtr4g091240.1 1043 85.3 92.2 | NAD(P)H dehydrogenase B2 | HC | chr4:36124694-36129496 | 20130731
Soybean Glyma08g06380.1 1021 85.3 91.6  
LJGI gnl|LJGI|TC63897 3412 99.9 99.9 similar to UniRef100_Q2HTY1 Cluster: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Calcium- binding EF-hand; n=1; Medicago truncatula|Rep: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Calcium- binding EF-hand - Medicago truncatula (Barrel medic), partial (97%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0445550.1 length: 574 aa.
IPR002048 EF-hand domain
method AccNumber shortName E-value location
Molecular Function GO:0005509 calcium ion binding    
HMMSmart SM00054 EF-hand, 0.0014 376-404
ProfileScan PS50222 EF_HAND_2 13.035 372-407
IPR011992 EF-hand-like domain
Molecular Function GO:0005509 calcium ion binding    
Gene3D G3DSA:1.10.238.10 no description 4.2e-06 317-410
IPR013027 FAD-dependent pyridine nucleotide-disulphide oxidoreductase
Biological Process GO:0055114 oxidation-reduction process    
FPrintScan PR00368 FADPNR 4.6e-09 25-44
154-172
215-233
344-366
IPR018247 EF-Hand 1, calcium-binding site
PatternScan PS00018 EF_HAND_1 NA 385-397
IPR023753 Pyridine nucleotide-disulphide oxidoreductase, FAD/NAD(P)-binding domain
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF07992 Pyr_redox_2 6.3e-32 50-369
no_ID  
Gene3D G3DSA:3.50.50.60 no description 2.3e-26 44-159
160-316
HMMPanther PTHR22915 NADH 1.3e-221 43-574
HMMPanther PTHR22915:SF4 NADH 1.3e-221 43-574
Seg seg seg NA 376-387
superfamily SSF51905 FAD/NAD(P)-binding 1.3e-20 47-268
210-369
Wolf-PSORT
Lj4g3v0445550.1	cyto 7, plas 4, cyto_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0445550.1