Miyakogusa Predicted Gene

Lj4g3v0445480.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KQQ6_SOYBN 1016 85.6 90.6 (tr|I1KQQ6) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT3G62980.1 641 56.5 71.2 | Symbols: TIR1 | F-box/RNI-like superfamily protein | chr3:23273479-23276181 REVERSE LENGTH=594
Medicago Medtr4g091290.1 1008 83.6 90.8 | transport inhibitor response 1 protein | HC | chr4:36143922-36147200 | 20130731
Soybean Glyma08g06390.1 1016 85.6 90.6  
LJGI gnl|LJGI|TC68648 954 100.0 100.0 similar to UniRef100_A7QYI3 Cluster: Chromosome undetermined scaffold_247, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_247, whole genome shotgun sequence - Vitis vinifera (Grape), partial (19%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0445480.1 length: 623 aa.
IPR006553 Leucine-rich repeat, cysteine-containing subtype
method AccNumber shortName E-value location
HMMSmart SM00367 Leucine-rich 51 117-141
142-167
327-350
386-410
446-469
495-519
no_ID  
Gene3D G3DSA:3.80.10.10 no description 1.6e-26 22-276
277-508
HMMPanther PTHR23125 F-BOX/LEUCINE 7.3e-257 22-583
HMMPanther PTHR23125:SF17 GRR1-RELATED, 7.3e-257 22-583
HMMPfam PF13516 LRR_6 0.028 168-186
superfamily SSF52047 RNI-like 2.9e-34 31-549
Wolf-PSORT
Lj4g3v0445480.1	nucl 6.5, cyto_nucl 6, cyto 4.5, chlo 1, mito 1, cysk 1, chlo_mito 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0445480.1