Miyakogusa Predicted Gene

Lj4g3v0423210.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3SV96_MEDTR 540 70.8 83.1 (tr|I3SV96) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep AT1G55890.1 374 52.2 73.9 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr1:20901364-20902560 FORWARD LENGTH=398
Medicago Medtr2g103550.2 183 32.2 53.4 | PPR containing plant-like protein | HC | chr2:44583250-44580161 | 20130731
Soybean Glyma07g30720.1 533 68.4 82.3  
LJGI gnl|LJGI|TC58584 2062 100.0 100.0 weakly similar to UniRef100_A7R6L1 Cluster: Chromosome undetermined scaffold_1327, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_1327, whole genome shotgun sequence - Vitis vinifera (Grape), partial (65%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0423210.1 length: 375 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.02 102-127
239-268
HMMPfam PF13041 PPR_2 5.9e-09 165-213
270-318
HMMPfam PF13812 PPR_3 0.59 132-156
HMMTigr TIGR00756 PPR: 8.1e-05 102-129
168-201
203-237
239-271
274-306
ProfileScan PS51375 PPR 7.826 95-129
166-200
130-160
201-235
236-270
271-305
306-340
no_ID  
HMMPanther PTHR24015 FAMILY 1.8e-72 63-366
Seg seg seg NA 11-26
Wolf-PSORT
Lj4g3v0423210.1	chlo 9, mito 3, extr 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0423210.1