Miyakogusa Predicted Gene
- Lj4g3v0412750.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KL92_SOYBN |
624 |
81.6 |
88.9 |
(tr|I1KL92) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT2G14530.1 |
539 |
71.0 |
83.8 |
| Symbols: TBL13 | TRICHOME BIREFRINGENCE-LIKE 13 | chr2:6187484-6190137 FORWARD LENGTH=412 |
| Medicago |
Medtr6g016240.1 |
639 |
83.2 |
89.6 |
| Pmr5/Cas1p GDSL/SGNH-like acyl-esterase family protein | HC | chr6:5930380-5925815 | 20130731 |
| Soybean |
Glyma07g30480.1 |
624 |
81.6 |
88.9 |
|
| LJGI |
--No_Hits--
|
|
|
|
|
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0412750.1 |
length: 410 aa. |
| IPR025846 |
PMR5 N-terminal domain |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF14416 |
PMR5N |
7.3e-14 |
59-112 |
| IPR026057 |
PC-Esterase |
| HMMPfam |
PF13839 |
PC-Esterase |
1.8e-42 |
113-402 |
| no_ID |
|
| HMMPanther |
PTHR32285 |
FAMILY |
1.8e-102 |
22-410 |
| Seg |
seg |
seg |
NA |
17-50 |
- Wolf-PSORT
Lj4g3v0412750.1 mito 4.5, chlo 4, cyto_mito 3, plas 2, extr 1, vacu 1, E.R. 1, nucl_plas 1, golg_plas 1, E.R._vacu 1, cysk_plas 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0412750.1 |
|