Miyakogusa Predicted Gene
- Lj4g3v0412640.3
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I1KL88_SOYBN |
176 |
83.3 |
92.2 |
(tr|I1KL88) Uncharacterized protein OS=Glycine max PE=4 SV=1 |
| TAIR_pep |
AT1G58440.1 |
148 |
70.3 |
83.2 |
| Symbols: XF1, SQE1 | FAD/NAD(P)-binding oxidoreductase family protein | chr1:21714094-21717246 REVERSE LENGTH=531 |
| Medicago |
Medtr1g017270.1 |
169 |
79.4 |
91.2 |
| squalene monooxygenase | HC | chr1:4770122-4765355 | 20130731 |
| Soybean |
Glyma07g30440.1 |
176 |
83.3 |
92.2 |
|
| LJGI |
gnl|LJGI|TC81169 |
422 |
100.0 |
100.0 |
similar to UniRef100_Q506K3 Cluster: Squalene monooxygenase; n=1; Datura inoxia|Rep: Squalene monooxygenase - Datura innoxia (Downy thornapple) (Datura meteloides), partial (13%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0412640.3 |
length: 103 aa. |
| IPR013698 |
Squalene epoxidase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0004506 |
squalene monooxygenase activity |
|
|
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| Molecular Function |
GO:0050660 |
flavin adenine dinucleotide binding |
|
|
| Biological Process |
GO:0055114 |
oxidation-reduction process |
|
|
| HMMPfam |
PF08491 |
SE |
6.1e-16 |
1-62 |
| no_ID |
|
| HMMPanther |
PTHR10835 |
SQUALENE |
2.5e-28 |
1-93 |
- Wolf-PSORT
Lj4g3v0412640.3 cyto 4, plas 4, cyto_plas 4, chlo 2, vacu 2, golg_plas 2, cyto_pero 2, cysk_plas 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0412640.3 |
|