Miyakogusa Predicted Gene

Lj4g3v0412640.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JTY5_MEDTR 491 76.6 84.1 (tr|G7JTY5) Squalene epoxidase OS=Medicago truncatula GN=MTR_4g092640 PE=4 SV=1
TAIR_pep AT1G58440.1 389 68.4 80.0 | Symbols: XF1, SQE1 | FAD/NAD(P)-binding oxidoreductase family protein | chr1:21714094-21717246 REVERSE LENGTH=531
Medicago Medtr4g092640.1 491 76.6 84.1 | squalene monooxygenase | HC | chr4:36749132-36744844 | 20130731
Soybean Glyma07g30440.1 485 74.6 82.8  
LJGI gnl|LJGI|GO036224 434 87.0 87.0 homologue to UniRef100_Q2HY08 Cluster: Squalene epoxidase; n=1; Medicago sativa|Rep: Squalene epoxidase - Medicago sativa (Alfalfa), partial (20%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0412640.1 length: 319 aa.
IPR003042 Aromatic-ring hydroxylase-like
method AccNumber shortName E-value location
Biological Process GO:0008152 metabolic process    
Molecular Function GO:0016491 oxidoreductase activity    
FPrintScan PR00420 RNGMNOXGNASE 3e-05 63-85
212-227
IPR006076 FAD dependent oxidoreductase
Molecular Function GO:0016491 oxidoreductase activity    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01266 DAO 3.5e-06 63-93
IPR013698 Squalene epoxidase
Molecular Function GO:0004506 squalene monooxygenase activity    
Cellular Component GO:0016021 integral to membrane    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08491 SE 3.2e-40 212-319
no_ID  
Gene3D G3DSA:3.50.50.60 no description 1.2e-19 62-230
HMMPanther PTHR10835 SQUALENE 1.8e-128 62-319
Seg seg seg NA 64-75
superfamily SSF51905 FAD/NAD(P)-binding 7.7e-27 60-263
Wolf-PSORT
Lj4g3v0412640.1	cyto 5, cysk 3, E.R. 2.5, cysk_nucl 2.5, E.R._vacu 2.5, cyto_pero 2.5, cyto_plas 2.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0412640.1