Miyakogusa Predicted Gene

Lj4g3v0386050.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KL59_SOYBN 474 70.7 78.7 (tr|I1KL59) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G21175.1 172 51.1 64.0 | Symbols: ZML1, TIFY2B, GATA24 | ZIM-like 1 | chr3:7422832-7424598 FORWARD LENGTH=297
Medicago Medtr4g093730.1 369 63.7 73.0 | GATA transcription factor | HC | chr4:37055500-37051502 | 20130731
Soybean Glyma07g30140.1 474 70.7 78.7  
LJGI gnl|LJGI|TC68035 83.8 83.9 83.9 similar to UniRef100_A7QM28 Cluster: Chromosome undetermined scaffold_123, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_123, whole genome shotgun sequence - Vitis vinifera (Grape), partial (46%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0386050.1 length: 356 aa.
IPR000679 Zinc finger, GATA-type
method AccNumber shortName E-value location
Molecular Function GO:0003700 sequence-specific DNA binding transcription factor activity    
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Molecular Function GO:0043565 sequence-specific DNA binding    
HMMPfam PF00320 GATA 5.6e-14 195-231
HMMSmart SM00401 zinc 9.5e-14 189-242
PatternScan PS00344 GATA_ZN_FINGER_1 NA 195-222
ProfileScan PS50114 GATA_ZN_FINGER_2 9.565 189-248
IPR010399 Tify
HMMPfam PF06200 tify 2.5e-10 59-89
HMMSmart SM00979 no description 2.3e-08 54-89
ProfileScan PS51320 TIFY 13.496 54-89
IPR010402 CCT domain
Molecular Function GO:0005515 protein binding    
HMMPfam PF06203 CCT 5.5e-16 125-167
ProfileScan PS51017 CCT 12.729 125-167
IPR013088 Zinc finger, NHR/GATA-type
Biological Process GO:0006355 regulation of transcription, DNA-dependent    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:3.30.50.10 no description 1.7e-14 193-236
no_ID  
HMMPanther PTHR10071 TRANSCRIPTION 1.2e-22 188-237
HMMPanther PTHR10071:SF128SUBFAMILY NOT 1.2e-22 188-237
Seg seg seg NA 40-58
131-144
superfamily SSF57716 Glucocorticoid 3.8e-16 189-257
Wolf-PSORT
Lj4g3v0386050.1	nucl 11, chlo 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0386050.1