Miyakogusa Predicted Gene

Lj4g3v0385920.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KL57_SOYBN 691 61.8 72.4 (tr|I1KL57) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G51580.1 247 30.9 46.2 | Symbols: | RNA-binding KH domain-containing protein | chr1:19125612-19128102 FORWARD LENGTH=621
Medicago Medtr4g093650.1 654 58.8 69.8 | RNA-binding KH domain protein | HC | chr4:37099130-37092340 | 20130731
Soybean Glyma07g30120.1 691 61.8 72.4  
LJGI gnl|LJGI|TC79337 1586 100.0 100.0 weakly similar to UniRef100_A7QM31 Cluster: Chromosome undetermined scaffold_123, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_123, whole genome shotgun sequence - Vitis vinifera (Grape), partial (16%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0385920.1 length: 584 aa.
IPR004087 K Homology domain
method AccNumber shortName E-value location
Molecular Function GO:0003723 RNA binding    
HMMSmart SM00322 K 0.00067 15-88
98-172
252-329
345-420
511-581
IPR004088 K Homology domain, type 1
Molecular Function GO:0003723 RNA binding    
HMMPfam PF00013 KH_1 2.2e-08 18-68
103-164
255-305
348-412
514-575
ProfileScan PS50084 KH_TYPE_1 14.340 16-83
99-167
253-324
346-419
512-576
no_ID  
Gene3D G3DSA:3.30.1370.10 no description 8e-11 13-69
99-173
252-305
342-419
512-580
HMMPanther PTHR10288 KH 6.7e-96 14-500
HMMPanther PTHR10288:SF53 KH 6.7e-96 14-500
Seg seg seg NA 111-124
156-169
433-447
superfamily SSF54791 Eukaryotic 9.7e-13 86-194
333-421
3-84
241-305
511-582
Wolf-PSORT
Lj4g3v0385920.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0385920.1