Miyakogusa Predicted Gene

Lj4g3v0385840.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I3T789_LOTJA 308 88.1 88.1 (tr|I3T789) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1
TAIR_pep AT4G33625.2 239 74.3 88.5 | Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Golgi apparatus membrane protein TVP15 (InterPro:IPR013714); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr4:16153114-16154543 REVERSE LENGTH=199
Medicago Medtr2g009630.1 243 79.1 87.8 | COPI associated protein | HC | chr2:1991877-1988318 | 20130731
Soybean Glyma08g07230.2 251 83.1 89.9  
LJGI gnl|LJGI|TC64672 1178 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0385840.1 length: 197 aa.
IPR013714 Golgi apparatus membrane protein TVP15
method AccNumber shortName E-value location
HMMPfam PF08507 COPI_assoc 5.7e-09 39-166
no_ID  
Coil coil coiled-coil NA 164-192
Seg seg seg NA 6-14
18-29
178-196
Wolf-PSORT
Lj4g3v0385840.1	vacu 9, plas 5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0385840.1 Not targeted -30.559 -3.014 -6.382 31.71% -21.163