Miyakogusa Predicted Gene

Lj4g3v0365710.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL I3SBJ7_MEDTR 470 59.7 67.7 (tr|I3SBJ7) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1

TAIR_pep AT1G58120.1 146 30.8 44.9 | Symbols: | BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:21520962-21522224 FORWARD LENGTH=420

Medicago Medtr4g093860.1 469 59.7 67.7 | transmembrane protein, putative | HC | chr4:37205961-37204481 | 20130731

Soybean Glyma15g06220.1 296 46.3 57.0

LJGI gnl|LJGI|FS320759 517 100.0 100.0 weakly similar to UniRef100_A7PJ20 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v0365710.1 length: 418 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 209-226
243-260
345-366

Wolf-PSORT

Lj4g3v0365710.1 chlo 4, cyto 3, E.R. 3, cyto_E.R. 3

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v0365710.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	I3SBJ7_MEDTR	470	59.7	67.7	(tr\|I3SBJ7) Uncharacterized protein OS=Medicago truncatula PE=2 SV=1
TAIR_pep	AT1G58120.1	146	30.8	44.9	\| Symbols: \| BEST Arabidopsis thaliana protein match is: methyltransferases (TAIR:AT5G01710.1); Has 93 Blast hits to 93 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 1; Fungi - 0; Plants - 92; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). \| chr1:21520962-21522224 FORWARD LENGTH=420
Medicago	Medtr4g093860.1	469	59.7	67.7	\| transmembrane protein, putative \| HC \| chr4:37205961-37204481 \| 20130731
Soybean	Glyma15g06220.1	296	46.3	57.0
LJGI	gnl\|LJGI\|FS320759	517	100.0	100.0	weakly similar to UniRef100_A7PJ20 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (8%)

no_ID
Lj4g3v0365710.1				length: 418 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	209-226 243-260 345-366