Miyakogusa Predicted Gene

Lj4g3v0365560.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7JV62_MEDTR 322 49.7 59.4 (tr|G7JV62) RING-H2 finger protein ATL1O OS=Medicago truncatula GN=MTR_4g093830 PE=4 SV=1
TAIR_pep AT1G72220.1 152 61.7 70.8 | Symbols: | RING/U-box superfamily protein | chr1:27184388-27185629 REVERSE LENGTH=413
Medicago Medtr4g093830.1 322 49.7 59.4 | RING-H2 zinc finger protein | HC | chr4:37228595-37226986 | 20130731
Soybean Glyma08g07470.1 283 47.3 56.5  
LJGI gnl|LJGI|TC74649 712 95.9 95.9 similar to UniRef100_Q8LFY8 Cluster: RING-H2 finger protein ATL1O; n=1; Arabidopsis thaliana|Rep: RING-H2 finger protein ATL1O - Arabidopsis thaliana (Mouse-ear cress), partial (5%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0365560.1 length: 359 aa.
IPR001841 Zinc finger, RING-type
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Molecular Function GO:0008270 zinc ion binding    
HMMPfam PF13639 zf-RING_2 3.3e-16 150-195
HMMSmart SM00184 Ring 8.5e-08 151-192
ProfileScan PS50089 ZF_RING_2 12.711 151-193
IPR013083 Zinc finger, RING/FYVE/PHD-type
Gene3D G3DSA:3.30.40.10 no description 9e-20 148-196
no_ID  
HMMPanther PTHR14155 RING 1.8e-37 54-219
Seg seg seg NA 84-93
216-265
301-321
superfamily SSF57850 RING/U-box 9.8e-21 145-199
Wolf-PSORT
Lj4g3v0365560.1	chlo 6, E.R. 3, nucl 2.5, mito 2, cysk_nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0365560.1