Miyakogusa Predicted Gene

Lj4g3v0353460.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7I8L0_MEDTR 62.8 57.4 75.9 (tr|G7I8L0) F-box protein OS=Medicago truncatula GN=MTR_1g058760 PE=4 SV=1
TAIR_pep AT1G70970.1 46.6 56.4 71.8 | Symbols: | F-box and associated interaction domains-containing protein | chr1:26759834-26761042 FORWARD LENGTH=402
Medicago Medtr1g058760.1 62.8 57.4 75.9 | F-box and associated interaction domain protein | LC | chr1:21897473-21897222 | 20130731
Soybean Glyma08g24680.1 55.1 47.3 69.1  
LJGI gnl|LJGI|TC59517 480 100.0 100.0 weakly similar to UniRef100_Q2HRF5 Cluster: Cyclin-like F-box; n=1; Medicago truncatula|Rep: Cyclin-like F-box - Medicago truncatula (Barrel medic), partial (42%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0353460.1 length: 84 aa.
IPR001810 F-box domain, cyclin-like
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00646 F-box 3.2e-10 7-43
HMMSmart SM00256 A 2.6e-10 7-47
ProfileScan PS50181 FBOX 10.133 7-46
superfamily SSF81383 F-box 1e-13 1-52
no_ID  
Gene3D G3DSA:1.20.1280.50 no description 3.6e-10 7-40
HMMPanther PTHR32133 FAMILY 2.2e-13 2-51
Seg seg seg NA 3-14
Wolf-PSORT
Lj4g3v0353460.1	cyto 9, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0353460.1 Not targeted -68.820 -14.501 -9.704 95.39% -44.615