Miyakogusa Predicted Gene

Lj4g3v0353410.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LPB7_SOYBN 1105 82.1 90.6 (tr|K7LPB7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT3G18840.2 708 53.4 72.4 | Symbols: | Tetratricopeptide repeat (TPR)-like superfamily protein | chr3:6496198-6498234 FORWARD LENGTH=678
Medicago Medtr4g068900.1 1046 79.2 87.9 | PPR containing plant-like protein | HC | chr4:25858642-25860684 | 20130731
Soybean Glyma11g12940.1 1066 82.9 91.1  
LJGI gnl|LJGI|FS337970 906 100.0 100.0 weakly similar to UniRef100_A7P944 Cluster: Chromosome chr3 scaffold_8, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr3 scaffold_8, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0353410.1 length: 642 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.65 7-30
113-133
144-165
279-305
307-332
483-506
HMMPfam PF13041 PPR_2 4e-12 173-219
409-456
HMMTigr TIGR00756 PPR: 6.5e-06 175-208
279-308
412-444
ProfileScan PS51375 PPR 6.445 5-39
173-207
141-171
109-139
274-308
243-273
409-443
376-406
444-474
480-510
546-580
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 1.5e-08 487-565
no_ID  
Coil coil coiled-coil NA 525-546
HMMPanther PTHR24015 FAMILY 1e-198 1-613
HMMPanther PTHR24015:SF169PENTATRICOPEPTIDE (PPR) 1e-198 1-613
Wolf-PSORT
Lj4g3v0353410.1	chlo 9, extr 2, vacu 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0353410.1