Miyakogusa Predicted Gene

Lj4g3v0341190.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1K2N1_SOYBN 946 76.7 84.4 (tr|I1K2N1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G09420.1 728 58.6 74.7 | Symbols: ATTOC64-V, MTOM64, TOC64-V, OM64, AtmtOM64 | translocon at the outer membrane of chloroplasts 64-V | chr5:2928316-2931750 FORWARD LENGTH=603
Medicago Medtr4g094205.1 906 74.4 81.0 | translocon at the outer membrane ofs-like protein | HC | chr4:37420752-37411766 | 20130731
Soybean Glyma05g24400.1 946 76.7 84.4  
LJGI gnl|LJGI|TC78149 1342 100.0 100.0 similar to UniRef100_A7QIF4 Cluster: Chromosome chr12 scaffold_103, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_103, whole genome shotgun sequence - Vitis vinifera (Grape), partial (34%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0341190.1 length: 601 aa.
IPR000120 Amidase
method AccNumber shortName E-value location
Molecular Function GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor    
HMMPanther PTHR11895 AMIDASE 8.3e-185 64-478
HMMPfam PF01425 Amidase 3.4e-56 69-455
IPR001440 Tetratricopeptide TPR-1
Molecular Function GO:0005515 protein binding    
HMMPfam PF00515 TPR_1 0.00023 556-589
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.2e-33 484-593
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 22.768 488-589
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.0017 488-521
522-555
556-589
ProfileScan PS50005 TPR 10.030 488-521
522-555
556-589
IPR023631 Amidase signature domain
Gene3D G3DSA:3.90.1300.10 no description 8.7e-73 59-458
superfamily SSF75304 Amidase 1.1e-67 22-465
no_ID  
HMMPanther PTHR11895:SF6 AMIDASE 8.3e-185 64-478
HMMPfam PF13414 TPR_11 9.9e-18 487-552
Seg seg seg NA 19-32
35-40
59-66
155-168
superfamily SSF48452 TPR-like 3.4e-29 479-596
Wolf-PSORT
Lj4g3v0341190.1	chlo 10, nucl 2, cyto 1, plas 1, cysk_nucl 1, cyto_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0341190.1