Miyakogusa Predicted Gene

Lj4g3v0341140.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7KPP6_SOYBN 1342 67.0 75.4 (tr|K7KPP6) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT5G64220.2 853 47.2 60.3 | Symbols: | Calmodulin-binding transcription activator protein with CG-1 and Ankyrin domains | chr5:25686434-25691903 FORWARD LENGTH=1050
Medicago Medtr4g094215.3 1210 62.5 72.0 | calmodulin-binding transcription activator 1 | HC | chr4:37460630-37451708 | 20130731
Soybean Glyma08g07680.1 1087 59.2 68.1  
LJGI gnl|LJGI|TC69984 2040 99.8 99.8 similar to UniRef100_Q9FY74 Cluster: Calmodulin-binding transcription activator 1; n=1; Arabidopsis thaliana|Rep: Calmodulin-binding transcription activator 1 - Arabidopsis thaliana (Mouse-ear cress), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0341140.1 length: 980 aa.
IPR000048 IQ motif, EF-hand binding site
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00612 IQ 0.00029 884-902
907-926
HMMSmart SM00015 Short 0.29 881-903
904-926
ProfileScan PS50096 IQ 9.066 882-911
905-929
IPR002110 Ankyrin repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00248 ankyrin 0.022 668-697
701-730
ProfileScan PS50088 ANK_REPEAT 10.152 701-733
IPR002909 Cell surface receptor IPT/TIG
Molecular Function GO:0005515 protein binding    
HMMPfam PF01833 TIG 0.00046 472-550
IPR005559 CG-1 DNA-binding domain
Molecular Function GO:0003677 DNA binding    
Cellular Component GO:0005634 nucleus    
HMMPfam PF03859 CG-1 5.6e-53 21-136
HMMSmart SM01076 no description 1.2e-80 18-136
ProfileScan PS51437 CG_1 80.610 15-141
IPR013783 Immunoglobulin-like fold
Gene3D G3DSA:2.60.40.10 no description 0.00024 468-558
IPR014756 Immunoglobulin E-set
superfamily SSF81296 E 1.3e-18 471-558
IPR020683 Ankyrin repeat-containing domain
Gene3D G3DSA:1.25.40.20 no description 5.7e-16 659-763
HMMPfam PF12796 Ank_2 1.4e-09 660-727
ProfileScan PS50297 ANK_REP_REGION 17.582 668-762
superfamily SSF48403 Ankyrin 9.9e-17 651-762
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.3e-06 885-926
no_ID  
HMMPanther PTHR23335 CALMODULIN-BINDING 3.1e-190 8-980
Seg seg seg NA 289-302
575-591
604-622
760-773
Wolf-PSORT
Lj4g3v0341140.1	nucl 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0341140.1