Miyakogusa Predicted Gene

Lj4g3v0335830.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L5G9_SOYBN 1299 80.4 87.0 (tr|K7L5G9) Uncharacterized protein (Fragment) OS=Glycine max PE=4 SV=1
TAIR_pep AT4G15570.1 873 57.0 72.4 | Symbols: MAA3 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:8893043-8898858 FORWARD LENGTH=818
Medicago Medtr5g053930.2 1136 70.0 79.2 | P-loop nucleoside triphosphate hydrolase superfamily protein | HC | chr5:22211102-22194060 | 20130731
Soybean Glyma08g08230.1 1220 73.3 80.6  
LJGI gnl|LJGI|TC72228 2948 99.5 99.5 similar to UniRef100_A7Q979 Cluster: Chromosome chr19 scaffold_66, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr19 scaffold_66, whole genome shotgun sequence - Vitis vinifera (Grape), partial (58%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0335830.1 length: 791 aa.
IPR014001 Helicase, superfamily 1/2, ATP-binding domain
method AccNumber shortName E-value location
HMMSmart SM00487 DEAD-like 0.0059 242-542
IPR026852 Probable helicase MAGATAMA 3
HMMPanther PTHR10887:SF27 TRNA-SPLICING 4.9e-211 4-775
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.8e-54 234-744
no_ID  
Gene3D G3DSA:3.40.50.300 no description 9.5e-56 474-571
HMMPanther PTHR10887 DNA2/NAM7 4.9e-211 4-775
HMMPfam PF13086 AAA_11 4e-66 246-518
HMMPfam PF13087 AAA_12 2e-60 526-722
Seg seg seg NA 458-476
752-763
Wolf-PSORT
Lj4g3v0335830.1	nucl 7, cyto 4, cysk_nucl 4
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0335830.1