Miyakogusa Predicted Gene

Lj4g3v0299470.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL G7IMM0_MEDTR 716 72.9 83.9 (tr|G7IMM0) Reticuline oxidase OS=Medicago truncatula GN=MTR_2g031420 PE=4 SV=1
TAIR_pep AT5G44360.1 501 52.1 68.3 | Symbols: | FAD-binding Berberine family protein | chr5:17872100-17873698 REVERSE LENGTH=532
Medicago Medtr2g031420.1 716 72.9 83.9 | FAD-binding berberine family protein | HC | chr2:11804357-11802695 | 20130731
Soybean Glyma08g08480.1 675 70.2 81.3  
LJGI gnl|LJGI|BW623629 56.0 96.9 96.9 similar to UniRef100_A7Q4S5 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (17%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0299470.1 length: 487 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 2.6e-26 39-176
IPR012951 Berberine/berberine-like
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08031 BBE 1.1e-22 427-483
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 17.860 35-209
superfamily SSF56176 FAD-binding 2.3e-49 37-210
IPR016167 FAD-binding, type 2, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.43.10 no description 4.7e-07 38-97
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 3.9e-12 98-210
no_ID  
HMMPanther PTHR32448 FAMILY 2.5e-243 26-487
Seg seg seg NA 138-152
Wolf-PSORT
Lj4g3v0299470.1	cyto 7, nucl 6
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0299470.1