Miyakogusa Predicted Gene

Lj4g3v0288350.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1KRB4_SOYBN 813 74.3 85.8 (tr|I1KRB4) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G11770.1 594 54.4 72.9 | Symbols: | FAD-binding Berberine family protein | chr1:3975679-3977289 FORWARD LENGTH=536
Medicago Medtr4g094515.1 805 72.2 84.3 | FAD-binding berberine family protein | LC | chr4:38124942-38130679 | 20130731
Soybean Glyma08g08530.1 813 74.3 85.8  
LJGI gnl|LJGI|GO011893 874 99.6 99.6 weakly similar to UniRef100_A7Q4U0 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0288350.1 length: 524 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 1.3e-26 84-220
IPR012951 Berberine/berberine-like
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08031 BBE 1.4e-20 461-518
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 17.240 80-254
superfamily SSF56176 FAD-binding 3.1e-47 32-255
IPR016167 FAD-binding, type 2, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.43.10 no description 0.00031 83-139
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 3e-10 141-255
no_ID  
HMMPanther PTHR32448 FAMILY 7.2e-277 3-524
Seg seg seg NA 6-22
183-194
Wolf-PSORT
Lj4g3v0288350.1	chlo 2, nucl 2, cyto 2, plas 2, extr 2, E.R. 2, cyto_nucl 2, nucl_plas 2, E.R._plas 2, cyto_E.R. 2, cyto_plas 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0288350.1