Miyakogusa Predicted Gene

Lj4g3v0287320.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7L5I0_SOYBN 833 77.5 85.6 (tr|K7L5I0) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G30760.1 603 57.9 71.8 | Symbols: | FAD-binding Berberine family protein | chr1:10918321-10920441 FORWARD LENGTH=534
Medicago Medtr4g094520.1 853 79.4 86.6 | FAD-binding berberine family protein | HC | chr4:38148362-38150837 | 20130731
Soybean Glyma05g25590.1 822 77.1 84.6  
LJGI gnl|LJGI|TC73391 1281 99.4 99.4 similar to UniRef100_A7Q4S5 Cluster: Chromosome chr10 scaffold_50, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr10 scaffold_50, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0287320.1 length: 533 aa.
IPR006094 FAD linked oxidase, N-terminal
method AccNumber shortName E-value location
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF01565 FAD_binding_4 1.1e-25 76-215
IPR012951 Berberine/berberine-like
Molecular Function GO:0016491 oxidoreductase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
HMMPfam PF08031 BBE 1.3e-21 468-525
IPR016166 FAD-binding, type 2
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0016614 oxidoreductase activity, acting on CH-OH group of donors    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
ProfileScan PS51387 FAD_PCMH 17.176 72-248
superfamily SSF56176 FAD-binding 1.8e-43 74-249
IPR016167 FAD-binding, type 2, subdomain 1
Molecular Function GO:0003824 catalytic activity    
Molecular Function GO:0008762 UDP-N-acetylmuramate dehydrogenase activity    
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Biological Process GO:0055114 oxidation-reduction process    
Gene3D G3DSA:3.30.43.10 no description 3.8e-05 75-136
IPR016169 CO dehydrogenase flavoprotein-like, FAD-binding, subdomain 2
Molecular Function GO:0050660 flavin adenine dinucleotide binding    
Gene3D G3DSA:3.30.465.10 no description 5.1e-11 137-249
no_ID  
HMMPanther PTHR32448 FAMILY 4.6e-256 1-532
Seg seg seg NA 3-25
171-185
229-233
246-259
Wolf-PSORT
Lj4g3v0287320.1	vacu 7, chlo 3, nucl 1, extr 1, E.R. 1, golg 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0287320.1