Miyakogusa Predicted Gene

Lj4g3v0281070.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1K307_SOYBN 1532 75.0 82.2 (tr|I1K307) Uncharacterized protein OS=Glycine max PE=3 SV=2
TAIR_pep AT4G18240.1 1217 66.5 79.7 | Symbols: ATSS4, SSIV, SS4 | starch synthase 4 | chr4:10082221-10087044 FORWARD LENGTH=1040
Medicago Medtr4g094595.1 1451 71.4 80.5 | starch synthase IV | HC | chr4:38325533-38333942 | 20130731
Soybean Glyma05g25790.1 1488 73.1 80.1  
LJGI gnl|LJGI|FS331492 1534 100.0 100.0 similar to UniRef100_Q9XGC1 Cluster: Starch synthase, isoform V; n=1; Vigna unguiculata|Rep: Starch synthase, isoform V - Vigna unguiculata (Cowpea), partial (29%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0281070.1 length: 1004 aa.
IPR001296 Glycosyl transferase, family 1
method AccNumber shortName E-value location
Biological Process GO:0009058 biosynthetic process    
HMMPfam PF00534 Glycos_transf_1 7.1e-12 805-964
IPR011835 Glycogen/starch synthase, ADP-glucose type
Molecular Function GO:0009011 starch synthase activity    
Biological Process GO:0009250 glucan biosynthetic process    
HAMAP MF_00484 Glycogen_synth 39.688 507-994
HMMTigr TIGR02095 glgA: 8.3e-170 508-993
IPR013534 Starch synthase, catalytic domain
HMMPfam PF08323 Glyco_transf_5 4.3e-65 509-747
no_ID  
Coil coil coiled-coil NA 147-175
185-213
240-313
340-368
378-424
Gene3D G3DSA:3.40.50.2000 no description 1e-73 762-974
HMMPanther PTHR12526 GLYCOSYLTRANSFERASE 6.8e-254 365-997
HMMPanther PTHR12526:SF17 STARCH 6.8e-254 365-997
Seg seg seg NA 24-36
48-59
93-103
281-304
522-533
superfamily SSF53756 UDP-Glycosyltransferase/glycogen 6.6e-108 509-994
Wolf-PSORT
Lj4g3v0281070.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0281070.1