Miyakogusa Predicted Gene
- Lj4g3v0258610.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
G7JDZ6_MEDTR |
288 |
74.9 |
81.8 |
(tr|G7JDZ6) Cytochrome B561-related protein OS=Medicago truncatula GN=MTR_4g096780 PE=4 SV=1 |
| TAIR_pep |
AT4G18260.1 |
190 |
51.1 |
66.8 |
| Symbols: | Cytochrome b561/ferric reductase transmembrane protein family | chr4:10093524-10097337 REVERSE LENGTH=545 |
| Medicago |
Medtr4g096780.1 |
288 |
74.9 |
81.8 |
| eukaryotic cytochrome b561 protein | HC | chr4:38511677-38507721 | 20130731 |
| Soybean |
Glyma08g08990.1 |
280 |
74.9 |
80.2 |
|
| LJGI |
gnl|LJGI|GO025722 |
58.0 |
88.7 |
88.7 |
similar to UniRef100_Q1H8M6 Cluster: Cytochrome B561-related protein; n=1; Beta vulgaris|Rep: Cytochrome B561-related protein - Beta vulgaris (Sugar beet), partial (9%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0258610.1 |
length: 184 aa. |
| IPR004877 |
Cytochrome b561, eukaryote |
| method |
AccNumber |
shortName |
E-value |
location |
| Cellular Component |
GO:0016021 |
integral to membrane |
|
|
| HMMPfam |
PF03188 |
Cytochrom_B561 |
4.4e-10 |
54-180 |
| IPR006593 |
Cytochrome b561/ferric reductase transmembrane |
| HMMSmart |
SM00665 |
Cytochrome |
7.4e-32 |
54-179 |
| ProfileScan |
PS50939 |
CYTOCHROME_B561 |
25.658 |
22-184 |
| no_ID |
|
| HMMPanther |
PTHR23130 |
FAMILY |
2.3e-29 |
23-184 |
| HMMPanther |
PTHR23130:SF19 |
HYPOTHETICAL |
2.3e-29 |
23-184 |
| Seg |
seg |
seg |
NA |
32-45 |
- Wolf-PSORT
Lj4g3v0258610.1 mito 4, vacu 4, chlo 3, extr 2, cyto_mito 2, E.R._vacu 2, mito_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0258610.1 |
|