Miyakogusa Predicted Gene

Lj4g3v0258600.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL C6SZX2_SOYBN 247 88.5 90.6 (tr|C6SZX2) Putative uncharacterized protein OS=Glycine max PE=1 SV=1
TAIR_pep AT3G52580.1 230 80.6 87.1 | Symbols: | Ribosomal protein S11 family protein | chr3:19503324-19504701 FORWARD LENGTH=150
Medicago Medtr2g019670.1 223 87.7 90.6 | ribosomal protein S11 | HC | chr2:6475619-6472687 | 20130731
Soybean Glyma15g10210.1 247 88.5 90.6  
LJGI gnl|LJGI|TC60994 898 100.0 100.0 homologue to UniRef100_A7QQP3 Cluster: Chromosome undetermined scaffold_143, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_143, whole genome shotgun sequence - Vitis vinifera (Grape), partial (96%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0258600.1 length: 150 aa.
IPR001971 Ribosomal protein S11
method AccNumber shortName E-value location
Molecular Function GO:0003735 structural constituent of ribosome    
Cellular Component GO:0005622 intracellular    
Cellular Component GO:0005840 ribosome    
Biological Process GO:0006412 translation    
Gene3D G3DSA:3.30.420.80 no description 8.4e-68 17-147
HAMAP MF_01310 Ribosomal_S11 20.768 3-147
HMMPIR PIRSF002131 Ribosomal 1.9e-45 1-150
HMMPanther PTHR11759 40S 6.9e-101 1-150
HMMPfam PF00411 Ribosomal_S11 1.6e-40 28-146
IPR018102 Ribosomal S11, conserved site
PatternScan PS00054 RIBOSOMAL_S11 NA 115-137
no_ID  
HMMPanther PTHR11759:SF1 40S 6.9e-101 1-150
Seg seg seg NA 99-110
140-149
superfamily SSF53137 Translational 1.3e-34 22-149
Wolf-PSORT
Lj4g3v0258600.1	cyto 10, nucl 2, mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0258600.1