Miyakogusa Predicted Gene

Lj4g3v0244110.1

Related links:

Predicted Sequence Links:

Genome Sequence: Lj3.0_chr4

Full length sequence(42341900 bp) Sequence Cut

Init: Term:
reverse complement

Results of Blast2 searches (The best-hits are tabulated.):

database Accession Score Iden
(%) Posi
(%) Definition

TrEMBL A2Q573_MEDTR 459 74.4 78.4 (tr|A2Q573) Uncharacterized protein OS=Medicago truncatula GN=MTR_7g021620 PE=2 SV=1

TAIR_pep AT5G44860.1 379 62.6 71.0 | Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | chr5:18110688-18111653 REVERSE LENGTH=321

Medicago Medtr7g021620.1 459 74.4 78.4 | transmembrane protein, putative | HC | chr7:6883195-6886674 | 20130731

Soybean Glyma05g26160.1 402 69.4 76.6

LJGI gnl|LJGI|GO037340 436 99.6 99.6 similar to UniRef100_A7P2Q2 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%)

A list of protein families, domains and functional sites (searches in InterPro)

Lj4g3v0244110.1 length: 320 aa.

no_ID

method AccNumber shortName E-value location

Seg seg seg NA 11-23
148-157
239-250
255-274

Wolf-PSORT

Lj4g3v0244110.1 vacu 8, E.R. 3, plas 1, extr 1, golg 1, golg_plas 1

PTS1 (Peroxisome targeting signal type 1)

entry_id prediction score sppta spptna fp profile

Lj4g3v0244110.1

Top Kazusa DNA Research Institute

database	Accession	Score	Iden (%)	Posi (%)	Definition
TrEMBL	A2Q573_MEDTR	459	74.4	78.4	(tr\|A2Q573) Uncharacterized protein OS=Medicago truncatula GN=MTR_7g021620 PE=2 SV=1
TAIR_pep	AT5G44860.1	379	62.6	71.0	\| Symbols: \| unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). \| chr5:18110688-18111653 REVERSE LENGTH=321
Medicago	Medtr7g021620.1	459	74.4	78.4	\| transmembrane protein, putative \| HC \| chr7:6883195-6886674 \| 20130731
Soybean	Glyma05g26160.1	402	69.4	76.6
LJGI	gnl\|LJGI\|GO037340	436	99.6	99.6	similar to UniRef100_A7P2Q2 Cluster: Chromosome chr1 scaffold_5, whole genome shotgun sequence; n=1; Vitis vinifera\|Rep: Chromosome chr1 scaffold_5, whole genome shotgun sequence - Vitis vinifera (Grape), partial (48%)

no_ID
Lj4g3v0244110.1				length: 320 aa.
method	AccNumber	shortName	E-value	location
Seg	seg	seg	NA	11-23 148-157 239-250 255-274