Miyakogusa Predicted Gene

Lj4g3v0243990.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K360_SOYBN 1113 81.7 84.5 (tr|I1K360) Uncharacterized protein OS=Glycine max PE=3 SV=1
TAIR_pep AT2G30950.1 1014 77.0 81.7 | Symbols: VAR2, FTSH2 | FtsH extracellular protease family | chr2:13174692-13177064 FORWARD LENGTH=695
Medicago Medtr4g094662.1 1092 80.3 83.6 | ATP-dependent zinc metalloprotease FTSH protein | HC | chr4:38681608-38677988 | 20130731
Soybean Glyma05g26230.1 1113 81.7 84.5  
LJGI gnl|LJGI|TC67783 2987 99.9 99.9 homologue to UniRef100_A7PJL7 Cluster: Chromosome chr12 scaffold_18, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr12 scaffold_18, whole genome shotgun sequence - Vitis vinifera (Grape), partial (69%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0243990.1 length: 688 aa.
IPR000642 Peptidase M41
method AccNumber shortName E-value location
Molecular Function GO:0004222 metalloendopeptidase activity    
Molecular Function GO:0005524 ATP binding    
Biological Process GO:0006508 proteolysis    
HMMPfam PF01434 Peptidase_M41 2.1e-75 457-665
IPR003593 AAA+ ATPase domain
Molecular Function GO:0000166 nucleotide binding    
Molecular Function GO:0017111 nucleoside-triphosphatase activity    
HMMSmart SM00382 ATPases 8.5e-25 259-398
IPR003959 ATPase, AAA-type, core
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00004 AAA 4.6e-45 263-394
IPR003960 ATPase, AAA-type, conserved site
Molecular Function GO:0005524 ATP binding    
PatternScan PS00674 AAA NA 366-384
IPR005936 Peptidase, FtsH
Molecular Function GO:0004222 metalloendopeptidase activity    
Cellular Component GO:0016020 membrane    
Biological Process GO:0030163 protein catabolic process    
HAMAP MF_01458 FtsH 35.086 29-682
HMMTigr TIGR01241 FtsH_fam: 1.4e-210 172-666
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 1.6e-73 216-468
no_ID  
Gene3D G3DSA:1.10.8.60 no description 3.7e-22 404-471
Gene3D G3DSA:3.40.50.300 no description 2.3e-61 224-403
HMMPanther PTHR23076 METALLOPROTEASE 0 51-679
HMMPanther PTHR23076:SF24 EMB2458 0 51-679
Seg seg seg NA 61-79
177-210
332-342
434-447
superfamily SSF140990 FtsH 3.7e-62 476-678
Wolf-PSORT
Lj4g3v0243990.1	chlo 13
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0243990.1