Miyakogusa Predicted Gene

Lj4g3v0231930.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7MWS5_SOYBN 1479 87.5 92.2 (tr|K7MWS5) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT1G79490.1 1265 78.1 90.0 | Symbols: EMB2217 | Pentatricopeptide repeat (PPR) superfamily protein | chr1:29900617-29903127 FORWARD LENGTH=836
Medicago Medtr4g094688.1 1480 87.0 93.0 | PPR containing plant protein | HC | chr4:38731040-38725816 | 20130731
Soybean Glyma19g07810.1 1261 85.6 89.6  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0231930.1 length: 814 aa.
IPR002625 Smr protein/MutS2 C-terminal
method AccNumber shortName E-value location
HMMSmart SM00463 Small 1.2e-09 685-764
ProfileScan PS50828 SMR 12.531 688-764
IPR002885 Pentatricopeptide repeat
HMMPfam PF01535 PPR 0.0018 331-356
363-391
399-427
HMMPfam PF13041 PPR_2 9.3e-08 256-303
433-476
HMMTigr TIGR00756 PPR: 9.3e-05 258-290
293-324
328-359
363-395
398-430
433-464
ProfileScan PS51375 PPR 5.514 182-216
220-254
255-289
290-324
325-359
360-394
395-429
430-464
465-499
501-533
534-568
641-675
no_ID  
HMMPanther PTHR24015 FAMILY 4e-88 146-582
Seg seg seg NA 645-654
Wolf-PSORT
Lj4g3v0231930.1	chlo 9, mito 3, cyto_mito 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0231930.1