Miyakogusa Predicted Gene
- Lj4g3v0200200.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
I3SX54_LOTJA |
376 |
94.4 |
95.9 |
(tr|I3SX54) Uncharacterized protein OS=Lotus japonicus PE=2 SV=1 |
| TAIR_pep |
AT4G18425.1 |
248 |
59.8 |
72.9 |
| Symbols: | Protein of unknown function (DUF679) | chr4:10181421-10182062 REVERSE LENGTH=213 |
| Medicago |
Medtr2g014550.1 |
313 |
76.5 |
86.2 |
| transmembrane protein, putative | HC | chr2:4179413-4178399 | 20130731 |
| Soybean |
Glyma13g30840.1 |
317 |
78.2 |
87.8 |
|
| LJGI |
gnl|LJGI|GO012988 |
930 |
94.9 |
94.9 |
similar to UniRef100_A7QLJ6 Cluster: Chromosome undetermined scaffold_119, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_119, whole genome shotgun sequence - Vitis vinifera (Grape), partial (84%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0200200.1 |
length: 196 aa. |
| IPR007770 |
Protein of unknown function DUF679 |
| method |
AccNumber |
shortName |
E-value |
location |
| HMMPfam |
PF05078 |
DUF679 |
2.2e-57 |
42-196 |
| no_ID |
|
| HMMPanther |
PTHR31621 |
FAMILY |
8.4e-68 |
1-196 |
- Wolf-PSORT
Lj4g3v0200200.1 chlo 7, cyto 3, plas 1, vacu 1, E.R. 1, pero 1, E.R._vacu 1, E.R._plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0200200.1 |
|