| database | Accession | Score | Iden (%) |
Posi (%) |
Definition |
|---|---|---|---|---|---|
| TrEMBL | K7L5L9_SOYBN | 605 | 76.8 | 82.0 | (tr|K7L5L9) Uncharacterized protein OS=Glycine max PE=3 SV=1 |
| TAIR_pep | AT1G48100.1 | 526 | 76.3 | 86.5 | | Symbols: | Pectin lyase-like superfamily protein | chr1:17766921-17769625 FORWARD LENGTH=475 |
| Medicago | Medtr4g094715.1 | 592 | 76.2 | 83.6 | | pectin lyase superfamily protein | HC | chr4:38832640-38835379 | 20130731 |
| Soybean | Glyma08g09300.1 | 605 | 76.8 | 82.0 | |
| LJGI | gnl|LJGI|BP060510 | 478 | 92.9 | 92.9 | similar to UniRef100_Q2HZ18 Cluster: Polygalacturonase precursor; n=1; Glycine max|Rep: Polygalacturonase precursor - Glycine max (Soybean), partial (14%) |
| Lj4g3v0200180.2 | length: 399 aa. | |||
| IPR000743 | Glycoside hydrolase, family 28 | |||
|---|---|---|---|---|
| method | AccNumber | shortName | E-value | location |
| Molecular Function | GO:0004650 | polygalacturonase activity | ||
| Biological Process | GO:0005975 | carbohydrate metabolic process | ||
| HMMPfam | PF00295 | Glyco_hydro_28 | 1.2e-81 | 118-399 |
| PatternScan | PS00502 | POLYGALACTURONASE | NA | 302-315 |
| IPR006626 | Parallel beta-helix repeat | |||
| HMMSmart | SM00710 | Parallel | 5.1e+02 | 245-271 272-293 325-346 354-375 |
| IPR011050 | Pectin lyase fold/virulence factor | |||
| superfamily | SSF51126 | Pectin | 4.2e-105 | 83-399 |
| IPR012334 | Pectin lyase fold | |||
| Gene3D | G3DSA:2.160.20.10 | no description | 5.3e-111 | 76-399 |
| no_ID | ||||
| HMMPanther | PTHR31375 | FAMILY | 2.9e-156 | 75-399 |
| HMMPanther | PTHR31375:SF0 | SUBFAMILY | 2.9e-156 | 75-399 |
| Seg | seg | seg | NA | 3-18 40-72 |
Lj4g3v0200180.2 chlo 4, extr 4, nucl 2, cyto 2, cyto_nucl 2, chlo_mito 2
| entry_id | prediction | score | sppta | spptna | fp | profile |
|---|---|---|---|---|---|---|
| Lj4g3v0200180.2 |