Miyakogusa Predicted Gene

Lj4g3v0188690.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9RY33_RICCO 2460 48.7 64.9 (tr|B9RY33) Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0814110 PE=4 SV=1
TAIR_pep AT1G65810.1 545 37.9 54.2 | Symbols: | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:24477043-24480728 REVERSE LENGTH=1050
Medicago Medtr0189s0030.1 3382 70.3 80.9 | P-loop nucleoside triphosphate hydrolase superfamily protein | HC | scaffold0189:14094-24465 | 20130731
Soybean Glyma05g26540.1 1498 67.1 76.9  
LJGI gnl|LJGI|BW628155 920 100.0 100.0  
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0188690.1 length: 2756 aa.
IPR011990 Tetratricopeptide-like helical
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 0.00078 1847-1875
IPR014016 UvrD-like Helicase, ATP-binding domain
Molecular Function GO:0005524 ATP binding    
HMMPfam PF00580 UvrD-helicase 1e-06 1270-1369
ProfileScan PS51198 UVRD_HELICASE_ATP_BIND 15.680 1022-1419
IPR027417 P-loop containing nucleoside triphosphate hydrolase
superfamily SSF52540 P-loop 2.7e-33 169-786
1020-1599
no_ID  
Coil coil coiled-coil NA 1911-1932
Gene3D G3DSA:3.40.50.300 no description 2.7e-08 516-616
1307-1417
1573-1597
HMMPanther PTHR10887 DNA2/NAM7 3e-203 1-2713
HMMPanther PTHR10887:SF236SUBFAMILY NOT 3e-203 1-2713
HMMPfam PF13086 AAA_11 6.3e-36 179-561
HMMPfam PF13087 AAA_12 7.3e-54 570-766
Seg seg seg NA 207-221
836-851
1001-1012
1840-1856
2100-2115
2403-2417
2737-2756
superfamily SSF48452 TPR-like 4.3e-06 1616-1754
Wolf-PSORT
Lj4g3v0188690.1	nucl 6, cyto 3, cysk_nucl 3, plas 2, cyto_E.R. 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0188690.1