Miyakogusa Predicted Gene

Lj4g3v0166390.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL I1K3A1_SOYBN 786 67.6 73.9 (tr|I1K3A1) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G02160.1 320 41.7 54.5 | Symbols: | CCCH-type zinc finger family protein | chr2:553407-555899 REVERSE LENGTH=669
Medicago Medtr4g114040.1 150 55.0 64.2 | nucleic acid-binding protein, putative | LC | chr4:46926850-46930364 | 20130731
Soybean Glyma05g26620.1 786 67.6 73.9  
LJGI gnl|LJGI|TC58921 1148 100.0 100.0 similar to UniRef100_A7PNI7 Cluster: Chromosome chr1 scaffold_22, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr1 scaffold_22, whole genome shotgun sequence - Vitis vinifera (Grape), partial (21%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0166390.1 length: 699 aa.
IPR000571 Zinc finger, CCCH-type
method AccNumber shortName E-value location
Molecular Function GO:0003676 nucleic acid binding    
Molecular Function GO:0008270 zinc ion binding    
Gene3D G3DSA:4.10.1000.10 no description 0.00061 122-144
HMMPfam PF00642 zf-CCCH 0.00011 122-144
HMMSmart SM00356 zinc 3.3e-05 26-53
58-81
118-144
ProfileScan PS50103 ZF_C3H1 14.436 25-54
56-82
118-145
no_ID  
HMMPanther PTHR23102 ZINC 1.3e-62 22-144
HMMPanther PTHR23102:SF17 ZINC 1.3e-62 22-144
Seg seg seg NA 3-21
87-103
415-434
631-671
679-689
superfamily SSF90229 CCCH 2e-06 116-144
Wolf-PSORT
Lj4g3v0166390.1	nucl 13.5, cyto_nucl 7.5
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0166390.1