Miyakogusa Predicted Gene
- Lj4g3v0166320.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
C6TF12_SOYBN |
840 |
87.3 |
91.8 |
(tr|C6TF12) Uncharacterized protein OS=Glycine max PE=2 SV=1 |
| TAIR_pep |
AT5G17330.1 |
708 |
74.1 |
85.3 |
| Symbols: GAD, GAD1 | glutamate decarboxylase | chr5:5711141-5714839 FORWARD LENGTH=502 |
| Medicago |
Medtr3g064740.1 |
709 |
74.0 |
84.9 |
| glutamate decarboxylase | HC | chr3:29176442-29181491 | 20130731 |
| Soybean |
Glyma05g26660.1 |
840 |
87.3 |
91.8 |
|
| LJGI |
gnl|LJGI|TC69785 |
751 |
91.1 |
91.1 |
similar to UniRef100_Q6Q4I2 Cluster: Glutamate decarboxylase 4a; n=1; Brassica juncea|Rep: Glutamate decarboxylase 4a - Brassica juncea (Leaf mustard) (Indian mustard), partial (43%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0166320.1 |
length: 464 aa. |
| IPR002129 |
Pyridoxal phosphate-dependent decarboxylase |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0016831 |
carboxy-lyase activity |
|
|
| Biological Process |
GO:0019752 |
carboxylic acid metabolic process |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| HMMPfam |
PF00282 |
Pyridoxal_deC |
4.7e-94 |
2-350 |
| IPR010107 |
Glutamate decarboxylase |
| Molecular Function |
GO:0004351 |
glutamate decarboxylase activity |
|
|
| Biological Process |
GO:0006536 |
glutamate metabolic process |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| HMMPanther |
PTHR11999:SF1 |
GLUTAMATE |
3.2e-281 |
1-463 |
| HMMTigr |
TIGR01788 |
Glu-decarb-GAD: |
9.4e-201 |
1-413 |
| IPR015421 |
Pyridoxal phosphate-dependent transferase, major region, subdomain 1 |
| Molecular Function |
GO:0003824 |
catalytic activity |
|
|
| Molecular Function |
GO:0030170 |
pyridoxal phosphate binding |
|
|
| Gene3D |
G3DSA:3.40.640.10 |
no description |
1.5e-28 |
43-280 |
| IPR015424 |
Pyridoxal phosphate-dependent transferase |
| superfamily |
SSF53383 |
PLP-dependent |
2.7e-125 |
1-417 |
| no_ID |
|
| HMMPanther |
PTHR11999 |
GROUP |
3.2e-281 |
1-463 |
| Seg |
seg |
seg |
NA |
188-201 |
- Wolf-PSORT
Lj4g3v0166320.1 cysk 4, cyto 3, cysk_nucl 3, chlo 2, nucl 2, mito 2, chlo_mito 2, cyto_pero 2, cysk_plas 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0166320.1 |
|