Miyakogusa Predicted Gene
- Lj4g3v0166190.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
M5XPP0_PRUPE |
337 |
73.6 |
85.2 |
(tr|M5XPP0) Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa003339mg PE=4 SV=1 |
| TAIR_pep |
AT2G02040.1 |
307 |
64.8 |
81.5 |
| Symbols: ATPTR2-B, NTR1, PTR2-B, PTR2, ATPTR2 | peptide transporter 2 | chr2:487542-489707 FORWARD LENGTH=585 |
| Medicago |
Medtr3g462710.2 |
263 |
58.3 |
77.1 |
| proton-dependent oligopeptide transport family protein | HC | chr3:25075783-25072333 | 20130731 |
| Soybean |
Glyma05g26670.1 |
335 |
72.7 |
87.5 |
|
| LJGI |
gnl|LJGI|TC66812 |
63.9 |
86.8 |
86.8 |
homologue to UniRef100_Q7XAC3 Cluster: Peptide transporter 1; n=1; Vicia faba|Rep: Peptide transporter 1 - Vicia faba (Broad bean), partial (33%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0166190.1 |
length: 224 aa. |
| IPR000109 |
Proton-dependent oligopeptide transporter family |
| method |
AccNumber |
shortName |
E-value |
location |
| Molecular Function |
GO:0005215 |
transporter activity |
|
|
| Biological Process |
GO:0006810 |
transport |
|
|
| Cellular Component |
GO:0016020 |
membrane |
|
|
| HMMPanther |
PTHR11654 |
OLIGOPEPTIDE |
5.1e-124 |
1-217 |
| HMMPfam |
PF00854 |
PTR2 |
6.9e-32 |
2-150 |
| IPR016196 |
Major facilitator superfamily domain, general substrate transporter |
| superfamily |
SSF103473 |
MFS |
3.5e-10 |
65-222 |
| no_ID |
|
| Gene3D |
G3DSA:1.20.1250.20 |
no description |
3.9e-05 |
65-214 |
| HMMPanther |
PTHR11654:SF37 |
OLIGOPEPTIDE |
5.1e-124 |
1-217 |
- Wolf-PSORT
Lj4g3v0166190.1 plas 5.5, cyto_plas 3.5, chlo 2, vacu 2, E.R. 2, golg 2, E.R._vacu 2
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0166190.1 |
|