Miyakogusa Predicted Gene

Lj4g3v0151610.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL B9HZ40_POPTR 469 56.9 75.9 (tr|B9HZ40) Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_770877 PE=4 SV=1
TAIR_pep AT1G11710.1 358 45.5 65.9 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr1:3948886-3950859 FORWARD LENGTH=657
Medicago Medtr5g090210.1 226 32.3 54.7 | PPR containing plant-like protein | HC | chr5:39298399-39301458 | 20130731
Soybean Glyma13g09580.1 219 34.9 51.9  
LJGI --No_Hits--        
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0151610.1 length: 409 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.012 14-35
259-287
HMMPfam PF13041 PPR_2 8.6e-15 45-94
115-164
186-234
291-338
HMMPfam PF13812 PPR_3 0.0012 362-394
HMMTigr TIGR00756 PPR: 0.00055 48-82
84-117
118-151
189-222
226-256
259-288
293-325
327-361
362-395
ProfileScan PS51375 PPR 9.821 46-80
81-115
116-150
151-185
186-220
221-255
290-324
256-286
325-359
360-394
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 3.5e-07 81-355
no_ID  
HMMPanther PTHR24015 FAMILY 3.6e-105 14-403
HMMPanther PTHR24015:SF0 SUBFAMILY 3.6e-105 14-403
Seg seg seg NA 201-210
superfamily SSF81901 HCP-like 7.2e-07 119-373
Wolf-PSORT
Lj4g3v0151610.1	cyto 10, nucl 2, cysk 1, golg 1, nucl_plas 1
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0151610.1