Miyakogusa Predicted Gene

Lj4g3v0149440.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)		 Posi
(%)		 Definition
TrEMBL K7LGL7_SOYBN 732 80.8 89.6 (tr|K7LGL7) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT2G35030.1 535 58.4 77.2 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr2:14761080-14762963 REVERSE LENGTH=627
Medicago Medtr1g038860.1 696 79.0 87.8 | PPR containing plant-like protein | LC | chr1:14313044-14316621 | 20130731
Soybean Glyma09g41980.1 717 81.8 90.7  
LJGI gnl|LJGI|AU089102 807 96.3 96.3 weakly similar to UniRef100_A7QJL0 Cluster: Chromosome chr8 scaffold_106, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome chr8 scaffold_106, whole genome shotgun sequence - Vitis vinifera (Grape), partial (23%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0149440.1 length: 443 aa.
IPR002885 Pentatricopeptide repeat
method AccNumber shortName E-value location
HMMPfam PF01535 PPR 0.0072 51-80
187-207
355-384
HMMPfam PF12854 PPR_1 1.5e-08 16-46
HMMPfam PF13041 PPR_2 2.6e-10 110-159
215-262
HMMPfam PF13812 PPR_3 0.58 288-310
HMMTigr TIGR00756 PPR: 1.2e-06 21-50
51-80
83-109
113-147
217-250
ProfileScan PS51375 PPR 9.745 49-83
18-48
111-145
84-110
182-213
147-181
215-249
250-280
286-316
352-386
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 8.8e-16 345-373
no_ID  
HMMPanther PTHR24015 FAMILY 5.1e-184 9-442
HMMPanther PTHR24015:SF83 SUBFAMILY 5.1e-184 9-442
superfamily SSF48452 TPR-like 0.00043 180-279
23-137
Wolf-PSORT
Lj4g3v0149440.1	cyto 9, chlo 2, nucl 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0149440.1