Miyakogusa Predicted Gene

Lj4g3v0120420.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL I1MR20_SOYBN 1103 75.7 80.7 (tr|I1MR20) Uncharacterized protein OS=Glycine max PE=4 SV=2
TAIR_pep AT1G62390.1 849 61.9 71.9 | Symbols: Phox2 | Octicosapeptide/Phox/Bem1p (PB1) domain-containing protein / tetratricopeptide repeat (TPR)-containing protein | chr1:23084632-23086887 REVERSE LENGTH=751
Medicago Medtr4g132780.1 1091 74.0 80.3 | heat shock protein 70 (HSP70)-interacting protein, putative | HC | chr4:55535597-55532312 | 20130731
Soybean Glyma17g01320.1 1040 71.4 76.4  
LJGI gnl|LJGI|TC70265 759 98.3 98.3 similar to UniRef100_O48802 Cluster: F2401.12; n=3; Arabidopsis thaliana|Rep: F2401.12 - Arabidopsis thaliana (Mouse-ear cress), partial (15%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0120420.1 length: 762 aa.
IPR000270 Phox/Bem1p
method AccNumber shortName E-value location
Molecular Function GO:0005515 protein binding    
HMMPfam PF00564 PB1 3.1e-19 286-374
HMMSmart SM00666 PB1 3.4e-17 284-376
IPR011990 Tetratricopeptide-like helical
Molecular Function GO:0005515 protein binding    
Gene3D G3DSA:1.25.40.10 no description 2.2e-28 39-172
IPR013026 Tetratricopeptide repeat-containing domain
Molecular Function GO:0005515 protein binding    
ProfileScan PS50293 TPR_REGION 14.953 41-148
IPR019734 Tetratricopeptide repeat
Molecular Function GO:0005515 protein binding    
HMMSmart SM00028 Tetratricopeptide 0.22 41-74
79-114
115-148
ProfileScan PS50005 TPR 8.142 41-74
115-148
no_ID  
Coil coil coiled-coil NA 610-631
Gene3D G3DSA:3.10.20.240 no description 4.4e-10 287-351
HMMPanther PTHR22904 TPR 1.9e-192 20-746
HMMPanther PTHR22904:SF25 TPR 1.9e-192 20-746
HMMPfam PF13414 TPR_11 1e-15 40-112
Seg seg seg NA 2-14
113-128
374-400
415-433
642-652
672-677
741-751
superfamily SSF48452 TPR-like 2e-06 41-172
453-622
superfamily SSF54277 CAD 3.5e-15 273-358
Wolf-PSORT
Lj4g3v0120420.1	chlo 8, mito 2.5, nucl 2, cyto_mito 2
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0120420.1