Miyakogusa Predicted Gene
- Lj4g3v0120360.1
- Related links:
- Predicted Sequence Links:
- Genome Sequence: Lj3.0_chr4
- Results of Blast2 searches (The best-hits are tabulated.):
| database |
Accession |
Score |
Iden
(%) |
Posi
(%) |
Definition |
|---|
| TrEMBL |
B7FK83_MEDTR |
84.3 |
93.0 |
100.0 |
(tr|B7FK83) Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1 |
| TAIR_pep |
AT4G05530.1 |
70.5 |
75.0 |
84.1 |
| Symbols: IBR1, SDRA | indole-3-butyric acid response 1 | chr4:2816462-2818074 FORWARD LENGTH=254 |
| Medicago |
Medtr4g132850.1 |
81.6 |
93.0 |
100.0 |
| short-chain dehydrogenase/reductase | HC | chr4:55568103-55570446 | 20130731 |
| Soybean |
Glyma17g01300.2 |
80.5 |
90.7 |
93.0 |
|
| LJGI |
gnl|LJGI|GO010191 |
410 |
100.0 |
100.0 |
similar to UniRef100_A7R0Z8 Cluster: Chromosome undetermined scaffold_332, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_332, whole genome shotgun sequence - Vitis vinifera (Grape), partial (32%) |
- A list of protein families, domains and functional sites (searches in InterPro)
| Lj4g3v0120360.1 |
length: 68 aa. |
| IPR016040 |
NAD(P)-binding domain |
| method |
AccNumber |
shortName |
E-value |
location |
| Gene3D |
G3DSA:3.40.50.720 |
no description |
1.3e-10 |
4-43 |
| IPR027052 |
Dehydrogenase/reductase SDR member 2/4 |
| Molecular Function |
GO:0016491 |
oxidoreductase activity |
|
|
| HMMPanther |
PTHR24322:SF21 |
SUBFAMILY |
5e-19 |
1-43 |
| no_ID |
|
| HMMPanther |
PTHR24322 |
FAMILY |
5e-19 |
1-43 |
| superfamily |
SSF51735 |
NAD(P)-binding |
5e-09 |
3-43 |
- Wolf-PSORT
Lj4g3v0120360.1 nucl 9, chlo 1, cyto 1, plas 1, extr 1, pero 1, cyto_pero 1, cyto_plas 1
- PTS1 (Peroxisome targeting signal type 1)
| entry_id |
prediction |
score |
sppta |
spptna |
fp |
profile |
| Lj4g3v0120360.1 |
|