Miyakogusa Predicted Gene

Lj4g3v0120060.1
Related links:
Predicted Sequence Links:
Genome Sequence: Lj3.0_chr4
Results of Blast2 searches (The best-hits are tabulated.):
database Accession Score Iden
(%)
Posi
(%)
Definition
TrEMBL K7MJB8_SOYBN 1298 73.3 82.7 (tr|K7MJB8) Uncharacterized protein OS=Glycine max PE=4 SV=1
TAIR_pep AT4G12570.1 781 50.6 65.5 | Symbols: UPL5 | ubiquitin protein ligase 5 | chr4:7445585-7448819 FORWARD LENGTH=873
Medicago Medtr4g133120.1 1139 64.9 75.9 | E3 ubiquitin-protein ligase UPL5-like protein | HC | chr4:55702325-55696646 | 20130731
Soybean Glyma07g39550.1 1286 78.1 86.1  
LJGI gnl|LJGI|TC80277 1419 99.9 99.9 similar to UniRef100_A7QZX3 Cluster: Chromosome undetermined scaffold_292, whole genome shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome undetermined scaffold_292, whole genome shotgun sequence - Vitis vinifera (Grape), partial (28%)
A list of protein families, domains and functional sites (searches in InterPro)
Lj4g3v0120060.1 length: 846 aa.
IPR000569 HECT
method AccNumber shortName E-value location
Molecular Function GO:0004842 ubiquitin-protein ligase activity    
Cellular Component GO:0005622 intracellular    
Biological Process GO:0006464 cellular protein modification process    
HMMPfam PF00632 HECT 3.9e-70 535-837
HMMSmart SM00119 Domain 4.4e-88 504-844
ProfileScan PS50237 HECT 69.185 506-846
superfamily SSF56204 Hect, 1.9e-93 462-838
IPR000626 Ubiquitin
Molecular Function GO:0005515 protein binding    
HMMPfam PF00240 ubiquitin 4.9e-17 64-129
HMMSmart SM00213 Ubiquitin 1e-18 55-127
IPR019955 Ubiquitin supergroup
ProfileScan PS50053 UBIQUITIN_2 19.695 55-131
IPR019956 Ubiquitin subgroup
FPrintScan PR00348 UBIQUITIN 3.2e-10 66-86
87-107
108-129
no_ID  
Gene3D G3DSA:3.10.20.90 no description 7.8e-18 55-129
Gene3D G3DSA:3.30.2160.10 no description 6.7e-16 608-686
HMMPanther PTHR11254 HECT 1.7e-208 392-844
HMMPanther PTHR11254:SF52 GB 1.7e-208 392-844
Seg seg seg NA 301-314
705-716
superfamily SSF54236 Ubiquitin-like 3.2e-21 26-135
Wolf-PSORT
Lj4g3v0120060.1	nucl 5, cyto 4, chlo 3, cysk_nucl 3
PTS1 (Peroxisome targeting signal type 1)
entry_id prediction score sppta spptna fp profile
Lj4g3v0120060.1